Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AM17-44
Accession NumberQRJS00000000.1
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| insulinase family protein | DW204_00125 | Not Available | + | 30207 - 31430 | 46653.5 |
| arac family transcriptional regulator | DW204_00130 | Not Available | + | 31504 - 31893 | 15335.8 |
| arginine--trna ligase | DW204_00135 | Not Available | + | 31979 - 33796 | 68477.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 32263 - 32625 | Not Available |
| ribonuclease h | DW204_00140 | Not Available | + | 33880 - 34506 | 23816.4 |
| alkaline phosphatase family protein | DW204_00145 | Not Available | + | 34523 - 36343 | 68395.5 |
| proton-conducting membrane transporter | DW204_00150 | Not Available | - | 36349 - 36996 | 23894.0 |
| glycoside hydrolase family 29 | DW204_00155 | Not Available | - | 37017 - 38831 | 68557.8 |
| phosphoenolpyruvate carboxykinase (atp) | DW204_00160 | Not Available | - | 39000 - 40604 | 59041.1 |
| uracil phosphoribosyltransferase | DW204_00165 | Not Available | + | 40885 - 41538 | 24334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
