Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AM17-44
Accession NumberQRJS00000000.1
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dde transposase family protein | DW204_07780 | Not Available | + | 1945471 - 1945917 | 16686.0 |
| Terminase | DW204_07785 | Not Available | + | 1945919 - 1947487 | 60159.3 |
| Hypothetical protein | DW204_07790 | Not Available | + | 1947506 - 1947931 | 16451.7 |
| Portal protein | DW204_07795 | Not Available | + | 1947933 - 1949321 | 52744.3 |
| Structural protein | DW204_07800 | Not Available | + | 1949339 - 1950754 | 54556.4 |
| hypothetical protein | DW204_07805 | Not Available | - | 1950737 - 1950970 | 8015.33 |
| Structural protein | DW204_07810 | Not Available | + | 1951040 - 1951672 | 24098.4 |
| group ii intron reverse transcriptase/maturase | DW204_00010 | Not Available | - | 1719 - 3374 | 63470.2 |
| endonuclease/exonuclease/phosphatase family protein | DW204_00015 | Not Available | + | 4081 - 5112 | 39233.6 |
| abc transporter permease | DW204_00025 | Not Available | - | 5947 - 7176 | 45712.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
