Segatella copri strain AM22-19

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-19 is a Gram-negative, anaerobic bacterium primarily located in the gut environment. This strain is part of the diverse microbiota that resides within the gastrointestinal tract, where it likely contributes to various metabolic processes. The anaerobic nature of Segatella copri strain AM22-19 suggests that it thrives in oxygen-depleted conditions, which are characteristic of the gut lumen. As a member of the gut microbiome, Segatella copri strain AM22-19 may play a role in the fermentation of dietary fibers and the production of short-chain fatty acids, which are critical for gut health and host metabolism. The characteristics of this strain highlight its potential importance in maintaining a balanced gut ecosystem, where it may interact with other microbial species and influence the overall microbial community structure. Understanding the specific functions and interactions of Segatella copri strain AM22-19 within the gut environment could provide insights into its contributions to intestinal health and its potential implications in the context of gut homeostasis. Further research may elucidate the specific metabolic pathways utilized by this strain, as well as its role in the complex interplay of gut microbiota, which is essential for overall host wellbeing.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-19

Accession NumberQRIF00000000.1

Gene Summary

Adenine Count

1026019 bp

Thymine Count

1032292 bp

Guanine Count

838853 bp

Cytosine Count

835331 bp

Genome Length

3733692 bp

Protein-coding Genes

3062 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDW262_00025Not Available+7392 - 880454876.9
multidrug transporterDW262_00030Not Available+8823 - 1000444552.6
hypothetical proteinDW262_00035Not Available+10041 - 1162761184.9
glycosyltransferase family 2 proteinDW262_00040Not Available+11654 - 1297051512.8
nucleotide sugar dehydrogenaseDW262_00045Not Available+13060 - 1431646312.9
response regulatorDW262_00050Not Available+14362 - 1474514322.3
pyruvate formate lyase-activating proteinDW262_00055Not Available-14742 - 1548828659.5
hypothetical proteinDW262_00060Not Available-15694 - 159218315.67
formate c-acetyltransferaseDW262_00065Not Available-16082 - 1832884473.5
thiamine phosphate synthaseDW262_00070Not Available-18706 - 1939525509.8

Displaying genes 11 – 20 of 3142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites