Segatella copri strain AM22-2

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AM22-2 is a Gram-negative, anaerobic bacterium that inhabits the gut environment. This strain, belonging to the genus Segatella, is characterized by its adaptation to anaerobic conditions, which aligns with its gut habitat where oxygen levels are typically low. The presence of such bacteria in the gastrointestinal tract plays a crucial role in maintaining the microbial balance and facilitating various metabolic processes. Gram-negative bacteria are known for their unique cell wall structure, which includes an outer membrane that can influence their interactions with the host and other microorganisms. While specific metabolic functions of Segatella copri strain AM22-2 have not been detailed, its anaerobic nature suggests it may participate in fermentation processes or contribute to the breakdown of complex carbohydrates in the gut. The gut microbiota, including strains like AM22-2, is increasingly recognized for its influence on host health, including digestion and immune response. The presence of Segatella copri strain AM22-2 in the gut ecosystem may indicate its potential role in the fermentation of dietary fibers, contributing to short-chain fatty acid production, which is beneficial for gut health. Further studies could elucidate the specific contributions of this strain to gut microbiota dynamics and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AM22-2

Accession NumberQRIE00000000.1

Gene Summary

Adenine Count

1047872 bp

Thymine Count

1054399 bp

Guanine Count

860323 bp

Cytosine Count

851245 bp

Genome Length

3814772 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tmrna,resume consensus sequence (at 89): attaattggcgaaaataaNot AvailableNot Available+278113 - 278509Not Available
pepsy domain-containing proteinDW263_01095Not Available+278669 - 28011454328.6
glycoside hydrolase family 127 proteinDW263_01100Not Available-280520 - 28299492428.7
glycoside hydrolaseDW263_01105Not Available-283001 - 28546092480.5
glycoside hydrolase family 97 proteinDW263_01110Not Available-285488 - 28747375457.1
hypothetical proteinDW263_01115Not Available+287752 - 290652109246.0
ragb/susd family nutrient uptake outer membrane proteinDW263_01125Not Available+294029 - 29581067254.5
rpn family recombination-promoting nuclease/putative transposaseDW263_01135Not Available-298504 - 29943036332.3
hypothetical proteinDW263_01140Not Available+299685 - 30103751907.8
s9 family peptidaseDW263_01145Not Available+301122 - 30326982323.3

Displaying genes 221 – 230 of 3220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites