Dorea longicatena strain AM23-13

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea longicatena strain AM23-13 is a Gram-positive anaerobic bacterium, which indicates that it thrives in environments without oxygen. Its classification as an anaerobe suggests that it may play a role in the fermentation processes within its natural habitat, particularly in the gastrointestinal tract of its host, Homo sapiens. This strain possesses flagella, which are tail-like structures that enable motility, potentially aiding in its movement within the intestinal environment. Dorea longicatena strain AM23-13 is characterized by having a single replicon, a feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number QRHW00000000.1, which provides a reference point for further studies and sequencing data. Given its association with humans, Dorea longicatena may contribute to the complex microbial ecosystem of the gut, where it could play a role in digestion or influence host health through its metabolic activities. The presence of this bacterium in the human gut microbiome underscores the importance of anaerobic microbes in maintaining a balanced and functional digestive system. Understanding its specific functions and interactions within the gut flora could provide insights into its potential benefits or implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea longicatena
Strainstrain AM23-13

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea longicatena strain AM23-13 AM23-13.Scaf98, whole genome

Gene Summary

Adenine Count

959036 bp

Thymine Count

928908 bp

Guanine Count

684713 bp

Cytosine Count

648346 bp

Genome Length

3221093 bp

Protein-coding Genes

2953 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rrf2 family transcriptional regulatorDW641_00060Not AvailablePositive12070 - 1253416734.2
cysteine desulfurase nifsDW641_00065Not AvailablePositive12599 - 1378043543.0
fe-s cluster assembly scaffold protein nifuDW641_00070Not AvailablePositive13833 - 1427616269.3
trna 2-thiouridine(34) synthase mnmaDW641_00075Not AvailablePositive14292 - 1537740204.7
php domain-containing proteinDW641_00080Not AvailablePositive15425 - 1626132380.6
type i glyceraldehyde-3-phosphate dehydrogenaseDW641_00085Not AvailablePositive16411 - 1742435994.0
phosphoglycerate kinaseDW641_00090Not AvailablePositive17517 - 1871041927.4
triose-phosphate isomeraseDW641_00095Not AvailablePositive18730 - 1947926780.9
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseDW641_00100Not AvailablePositive19575 - 2111355971.5
dna-binding response regulatorDW641_00105Not AvailablePositive21242 - 2192825886.5

Displaying genes 51 – 60 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.