Dorea longicatena strain AM23-13

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea longicatena strain AM23-13 is a Gram-positive anaerobic bacterium, which indicates that it thrives in environments without oxygen. Its classification as an anaerobe suggests that it may play a role in the fermentation processes within its natural habitat, particularly in the gastrointestinal tract of its host, Homo sapiens. This strain possesses flagella, which are tail-like structures that enable motility, potentially aiding in its movement within the intestinal environment. Dorea longicatena strain AM23-13 is characterized by having a single replicon, a feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number QRHW00000000.1, which provides a reference point for further studies and sequencing data. Given its association with humans, Dorea longicatena may contribute to the complex microbial ecosystem of the gut, where it could play a role in digestion or influence host health through its metabolic activities. The presence of this bacterium in the human gut microbiome underscores the importance of anaerobic microbes in maintaining a balanced and functional digestive system. Understanding its specific functions and interactions within the gut flora could provide insights into its potential benefits or implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea longicatena
Strainstrain AM23-13

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea longicatena strain AM23-13 AM23-13.Scaf98, whole genome

Gene Summary

Adenine Count

959036 bp

Thymine Count

928908 bp

Guanine Count

684713 bp

Cytosine Count

648346 bp

Genome Length

3221093 bp

Protein-coding Genes

2953 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorDW641_06250Not AvailableNegative1282703 - 128330523001.7
class i sam-dependent methyltransferaseDW641_06255Not AvailablePositive1283546 - 128430429607.8
hsp33 family molecular chaperone hsloDW641_06260Not AvailablePositive1284367 - 128524531671.3
nad(+) synthaseDW641_06265Not AvailablePositive1285257 - 128718271409.6
s1 rna-binding domain-containing proteinDW641_06270Not AvailableNegative1287799 - 128849425398.5
putative manganese-dependent inorganic diphosphataseDW641_06275Not AvailablePositive1288694 - 129034061756.2
flavin reductase family proteinDW641_06280Not AvailablePositive1290360 - 129096822488.4
peptidoglycan n-acetylglucosamine deacetylaseDW641_06285Not AvailablePositive1291213 - 129186925038.8
replication-associated recombination protein aDW641_06290Not AvailablePositive1291909 - 129322848752.3
heat-inducible transcription repressor hrcaDW641_06295Not AvailablePositive1293387 - 129444239519.6

Displaying genes 1211 – 1220 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.