Dorea longicatena strain AM23-13

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea longicatena strain AM23-13 is a Gram-positive anaerobic bacterium, which indicates that it thrives in environments without oxygen. Its classification as an anaerobe suggests that it may play a role in the fermentation processes within its natural habitat, particularly in the gastrointestinal tract of its host, Homo sapiens. This strain possesses flagella, which are tail-like structures that enable motility, potentially aiding in its movement within the intestinal environment. Dorea longicatena strain AM23-13 is characterized by having a single replicon, a feature that can influence its genetic stability and replication efficiency. The strain is cataloged under the accession number QRHW00000000.1, which provides a reference point for further studies and sequencing data. Given its association with humans, Dorea longicatena may contribute to the complex microbial ecosystem of the gut, where it could play a role in digestion or influence host health through its metabolic activities. The presence of this bacterium in the human gut microbiome underscores the importance of anaerobic microbes in maintaining a balanced and functional digestive system. Understanding its specific functions and interactions within the gut flora could provide insights into its potential benefits or implications for human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea longicatena
Strainstrain AM23-13

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea longicatena strain AM23-13 AM23-13.Scaf98, whole genome

Gene Summary

Adenine Count

959036 bp

Thymine Count

928908 bp

Guanine Count

684713 bp

Cytosine Count

648346 bp

Genome Length

3221093 bp

Protein-coding Genes

2953 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioether cross-link-forming sciff peptide maturaseDW641_06100Not AvailablePositive1247796 - 124919052922.9
protein translocase subunit secdDW641_06105Not AvailablePositive1249219 - 125138177938.0
single-stranded-dna-specific exonuclease recjDW641_06110Not AvailablePositive1251490 - 125325065635.2
adenine phosphoribosyltransferaseDW641_06115Not AvailablePositive1253324 - 125384819247.5
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDW641_06120Not AvailablePositive1253878 - 125622388937.0
mbl fold metallo-hydrolaseDW641_06125Not AvailablePositive1256228 - 125685122865.5
coproporphyrinogen dehydrogenase hemzDW641_06130Not AvailablePositive1256900 - 125833054567.5
histidine--trna ligaseDW641_06135Not AvailablePositive1258315 - 125958647742.9
aspartate--trna ligaseDW641_06140Not AvailablePositive1259646 - 126145468093.9
Trna-glyNot AvailableNot AvailablePositive1261638 - 1261710Not Available

Displaying genes 1181 – 1190 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.