Dorea formicigenerans strain AM23-7AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AM23-7AC is a Gram-positive, anaerobic bacterium primarily inhabiting the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may facilitate motility within the anaerobic environment of the gastrointestinal tract. Notably, Dorea formicigenerans strain AM23-7AC contains a single replicon, indicating a streamlined genetic structure. The habitat of the gut is significant as it plays a crucial role in human health, particularly in digestion and the maintenance of a balanced microbiome. As an anaerobe, Dorea formicigenerans thrives in oxygen-depleted environments, which are typical in the intestinal tract. The ability to survive and flourish in such conditions suggests that this strain may contribute to various metabolic processes, potentially influencing host health. Understanding the traits of Dorea formicigenerans strain AM23-7AC contributes to the broader knowledge of gut microbiota and their interactions with human hosts. The presence of flagella may enhance its ecological role, allowing it to navigate through the mucus layer or interact with other microbial populations. This could be important for maintaining gut homeostasis or participating in fermentation processes that benefit the host. Overall, Dorea formicigenerans strain AM23-7AC exemplifies the complex interplay between human hosts and their gut microorganisms, highlighting its potential role in gut health and function.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AM23-7AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AM23-7AC AM23-7AC.Scaf52, whole

Gene Summary

Adenine Count

935604 bp

Thymine Count

927552 bp

Guanine Count

643108 bp

Cytosine Count

629887 bp

Genome Length

3136321 bp

Protein-coding Genes

2836 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rok family proteinDW658_12590Not AvailablePositive2631839 - 263273532501.2
murr/rpir family transcriptional regulatorDW658_12595Not AvailablePositive2632751 - 263359032775.2
n-acetylglucosamine-6-phosphate deacetylaseDW658_12600Not AvailablePositive2633605 - 263475941571.2
ghkl domain-containing proteinDW658_12605Not AvailableNegative2634803 - 263613450449.1
dna-binding response regulatorDW658_12610Not AvailableNegative2636134 - 263689228723.2
ghkl domain-containing proteinDW658_12615Not AvailableNegative2636925 - 263819348725.6
dna-binding response regulatorDW658_12620Not AvailableNegative2638273 - 263900728429.0
carbohydrate-binding domain-containing proteinDW658_12625Not AvailablePositive2639201 - 264163087815.5
rpn family recombination-promoting nuclease/putative transposaseDW658_12630Not AvailablePositive2641900 - 264280234858.7
class c beta-lactamase-related serine hydrolaseDW658_12635Not AvailableNegative2642917 - 264473168286.2

Displaying genes 2411 – 2420 of 2902 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.