Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter diazotrophicus |
| Strain | strain H4X |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1664667 bp
Thymine Count
1665393 bp
Guanine Count
1536605 bp
Cytosine Count
1530224 bp
Genome Length
6396889 bp
Protein-coding Genes
5241 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DXT99_09665 | Not Available | Positive | 2336529 - 2337368 | 31492.4 |
| gluconate 5-dehydrogenase | DXT99_09670 | Not Available | Positive | 2337374 - 2338159 | 28226.1 |
| laci family transcriptional regulator | DXT99_09675 | Not Available | Positive | 2338197 - 2339228 | 38406.3 |
| tagaturonate reductase | DXT99_09680 | Not Available | Positive | 2339356 - 2340789 | 53901.4 |
| glucuronate isomerase | DXT99_09685 | Not Available | Positive | 2340838 - 2342238 | 54027.9 |
| sugar kinase | DXT99_09690 | Not Available | Positive | 2342240 - 2343253 | 36672.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXT99_09695 | Not Available | Positive | 2343289 - 2343963 | 24352.7 |
| trap transporter substrate-binding protein | DXT99_09700 | Not Available | Positive | 2343963 - 2345015 | 39646.4 |
| trap transporter small permease | DXT99_09705 | Not Available | Positive | 2345036 - 2345530 | 18471.3 |
| trap transporter large permease | DXT99_09710 | Not Available | Positive | 2345610 - 2346908 | 45391.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
