Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Seonamhaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Seonamhaeicola |
| Species | Seonamhaeicola aphaedonensis |
| Strain | strain CECT 8487 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1166001 bp
Thymine Count
1158378 bp
Guanine Count
575124 bp
Cytosine Count
607537 bp
Genome Length
3508581 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1569 | DFQ02_10169 | Not Available | Positive | 61260 - 61712 | 17716.4 |
| carboxymethylenebutenolidase | DFQ02_10170 | Not Available | Positive | 61831 - 62718 | 33187.5 |
| transglutaminase superfamily protein | DFQ02_10171 | Not Available | Positive | 62831 - 63766 | 36822.2 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | DFQ02_10172 | Not Available | Negative | 63877 - 65232 | 50620.9 |
| tetratricopeptide repeat protein | DFQ02_10173 | Not Available | Negative | 65355 - 66311 | 36623.9 |
| tonb-dependent susc/raga subfamily outer membrane receptor | DFQ02_10174 | Not Available | Positive | 66461 - 73006 | 250465.0 |
| pst family polysaccharide transporter | DFQ02_10175 | Not Available | Negative | 73017 - 74318 | 49320.2 |
| hypothetical protein | DFQ02_10176 | Not Available | Positive | 74533 - 74685 | 5664.98 |
| gtp-binding protein typa/bipa | DFQ02_10177 | Not Available | Negative | 74728 - 76527 | 67309.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 76610 - 76679 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
