Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Seonamhaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Seonamhaeicola |
| Species | Seonamhaeicola aphaedonensis |
| Strain | strain CECT 8487 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1166001 bp
Thymine Count
1158378 bp
Guanine Count
575124 bp
Cytosine Count
607537 bp
Genome Length
3508581 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | DFQ02_101540 | Not Available | Positive | 616059 - 616724 | 25430.7 |
| thioredoxin 1 | DFQ02_101541 | Not Available | Negative | 616721 - 617017 | 11164.5 |
| hypothetical protein | DFQ02_101542 | Not Available | Negative | 617173 - 618405 | 47118.1 |
| dna polymerase i | DFQ02_101543 | Not Available | Positive | 618636 - 621488 | 107299.0 |
| putative radical sam protein ygiq | DFQ02_101544 | Not Available | Negative | 621671 - 623614 | 74037.1 |
| translation factor sua5 | DFQ02_101545 | Not Available | Positive | 623745 - 624707 | 35248.7 |
| outer membrane putative beta-barrel porin/alpha-amylase | DFQ02_101546 | Not Available | Positive | 624817 - 625788 | 35886.7 |
| uncharacterized protein duf3179 | DFQ02_101547 | Not Available | Positive | 625795 - 626850 | 39617.0 |
| lsu ribosomal protein l13p | DFQ02_101548 | Not Available | Positive | 627003 - 627458 | 16691.2 |
| small subunit ribosomal protein s9 | DFQ02_101549 | Not Available | Positive | 627458 - 627844 | 14354.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
