Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Seonamhaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Seonamhaeicola |
| Species | Seonamhaeicola aphaedonensis |
| Strain | strain CECT 8487 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1166001 bp
Thymine Count
1158378 bp
Guanine Count
575124 bp
Cytosine Count
607537 bp
Genome Length
3508581 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | DFQ02_101510 | Not Available | Negative | 575801 - 577120 | 50793.7 |
| tryptophan 2,3-dioxygenase | DFQ02_101511 | Not Available | Negative | 577078 - 578001 | 36480.5 |
| uncharacterized protein duf3108 | DFQ02_101512 | Not Available | Negative | 578001 - 578786 | 30584.0 |
| 4-hydroxyphenylpyruvate dioxygenase | DFQ02_101513 | Not Available | Negative | 578974 - 580158 | 44886.7 |
| homogentisate 1,2-dioxygenase | DFQ02_101514 | Not Available | Negative | 580249 - 581403 | 44411.6 |
| nte family protein | DFQ02_101515 | Not Available | Negative | 581624 - 583771 | 80370.5 |
| excinuclease abc subunit c | DFQ02_101516 | Not Available | Negative | 583889 - 585679 | 68845.4 |
| hypothetical protein | DFQ02_101517 | Not Available | Positive | 585781 - 586206 | 16286.8 |
| ssu ribosomal protein s6p modification protein | DFQ02_101518 | Not Available | Positive | 586203 - 587078 | 32109.2 |
| hypothetical protein | DFQ02_101519 | Not Available | Positive | 587095 - 588072 | 36080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
