Parasphingopyxis lamellibrachiae strain DSM 26725

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Parasphingopyxidaceae

Genus

Parasphingopyxis

Description

Parasphingopyxis lamellibrachiae strain DSM 26725 is a Gram-negative, rod-shaped bacterium known for its aerobic metabolism. This organism thrives at an optimal temperature of 29°C, fitting within the mesophilic temperature range, which generally supports growth between 20°C and 45°C. The strain is characterized by the presence of a single replicon and is non-spore-forming, indicating a reliance on vegetative growth rather than sporulation for survival and reproduction. The strain is cataloged under the accession number QRDP00000000.1, which allows for its identification and study within microbial databases. Its aerobic nature suggests that it requires oxygen for its metabolic processes, which aligns with its classification as a member of the genus Parasphingopyxis, typically associated with environments rich in organic matter. From a biological and ecological perspective, the characteristics of P. lamellibrachiae strain DSM 26725 may position it as a significant player in the microbial community of its native habitat. Its ability to grow optimally at moderate temperatures and its aerobic requirements could influence nutrient cycling, particularly in environments where organic material is abundant. Understanding such traits helps elucidate the ecological roles of specific microbial species and their potential contributions to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyParasphingopyxidaceae
GenusParasphingopyxis
SpeciesParasphingopyxis lamellibrachiae
Strainstrain DSM 26725

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parasphingopyxis lamellibrachiae strain DSM 26725 Ga0244568_109,

Gene Summary

Adenine Count

583004 bp

Thymine Count

582925 bp

Guanine Count

887856 bp

Cytosine Count

893047 bp

Genome Length

2947125 bp

Protein-coding Genes

2863 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine-5'-phosphate glycosidaseDFR46_2883Not AvailableNegative2872574 - 287348832640.3
enamine deaminase rida (yjgf/yer057c/uk114 family)DFR46_2884Not AvailableNegative2873499 - 287390915135.3
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayDFR46_2885Not AvailableNegative2873935 - 287481631023.9
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunitDFR46_2886Not AvailableNegative2874813 - 287603344296.6
iron complex outermembrane receptor proteinDFR46_2887Not AvailableNegative2876041 - 287835384815.3
carbazole 1,9a-dioxygenase ferredoxin component/p-cumate 2,3-dioxygenase ferredoxin subunitDFR46_2888Not AvailableNegative2878550 - 287887011287.5
2'-aminobiphenyl-2,3-diol 1,2-dioxygenase large subunitDFR46_2889Not AvailableNegative2878867 - 287969429415.4
hypothetical proteinDFR46_2890Not AvailableNegative2879702 - 28799689912.68
2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoate hydrolaseDFR46_2891Not AvailableNegative2879974 - 288079229233.9
carbazole 1,9a-dioxygenase terminal dioxygenase componentDFR46_2892Not AvailableNegative2880804 - 288198245094.9

Displaying genes 2861 – 2870 of 2932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.