Pseudomonas sp. URMO17WK12:I10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I10 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait is significant as it suggests a potential efficiency in replication and metabolic processes. The strain is cataloged under the accession QRDM00000000.1, which provides a reference for its genetic information within microbial databases. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which is likely reflected in URMO17WK12:I10. This adaptability may enable the strain to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles and bioremediation efforts. The single replicon structure could also imply a more stable genome, which might be advantageous for survival in fluctuating environmental conditions. Such resilience could play a role in competition with other microorganisms and in the colonization of habitats where resources are limited. Overall, Pseudomonas sp. URMO17WK12:I10 exemplifies the ecological significance of Pseudomonas species in their ability to adapt and survive in various environments, underscoring the importance of understanding their genomic characteristics for potential applications in biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I10 D884DRAFT_scaffold00030.30, whole

Gene Summary

Adenine Count

891889 bp

Thymine Count

897207 bp

Guanine Count

1459582 bp

Cytosine Count

1445095 bp

Genome Length

4702100 bp

Protein-coding Genes

4170 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligaseD884_03483Not AvailablePositive3701358 - 370270748207.7
4-hydroxy-3-polyprenylbenzoate decarboxylaseD884_03484Not AvailablePositive3702704 - 370333322717.6
uncharacterized protein ycekD884_03485Not AvailablePositive3703330 - 37036179788.03
uncharacterized protein ybjt (duf2867 family)D884_03486Not AvailableNegative3703653 - 370429723600.7
hypothetical proteinD884_03487Not AvailableNegative3704325 - 370605863009.6
(r,r)-butanediol dehydrogenase/meso-butanediol dehydrogenase/diacetyl reductaseD884_03488Not AvailableNegative3706245 - 370733638433.7
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)D884_03489Not AvailableNegative3707362 - 370846839432.4
pyruvate dehydrogenase e1 component beta subunitD884_03490Not AvailableNegative3708465 - 370948736513.9
pyruvate dehydrogenase e1 component alpha subunitD884_03491Not AvailableNegative3709521 - 371049834483.9
putative polyphosphate/atp-dependent nad kinaseD884_03492Not AvailableNegative3710521 - 371157336333.1

Displaying genes 3471 – 3480 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.