Pseudomonas sp. URMO17WK12:I10

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I10 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait is significant as it suggests a potential efficiency in replication and metabolic processes. The strain is cataloged under the accession QRDM00000000.1, which provides a reference for its genetic information within microbial databases. Pseudomonas species are known for their metabolic versatility and adaptability to various environments, which is likely reflected in URMO17WK12:I10. This adaptability may enable the strain to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles and bioremediation efforts. The single replicon structure could also imply a more stable genome, which might be advantageous for survival in fluctuating environmental conditions. Such resilience could play a role in competition with other microorganisms and in the colonization of habitats where resources are limited. Overall, Pseudomonas sp. URMO17WK12:I10 exemplifies the ecological significance of Pseudomonas species in their ability to adapt and survive in various environments, underscoring the importance of understanding their genomic characteristics for potential applications in biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I10
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I10 D884DRAFT_scaffold00030.30, whole

Gene Summary

Adenine Count

891889 bp

Thymine Count

897207 bp

Guanine Count

1459582 bp

Cytosine Count

1445095 bp

Genome Length

4702100 bp

Protein-coding Genes

4170 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adp-ribose pyrophosphatase yjhb (nudix family)D884_01131Not AvailableNegative1245148 - 124558816719.8
isocitrate dehydrogenaseD884_01132Not AvailableNegative1245684 - 124790980105.7
cspa family cold shock proteinD884_01133Not AvailableNegative1248372 - 124873413058.3
atp-dependent clp protease adaptor protein clpsD884_01134Not AvailablePositive1248859 - 124922113653.3
atp-dependent clp protease atp-binding subunit clpaD884_01135Not AvailablePositive1249252 - 125152283192.6
translation initiation factor 1 (bif-1)D884_01136Not AvailableNegative1251609 - 12518278303.06
arginine-trna-protein transferaseD884_01137Not AvailableNegative1251929 - 125263627575.0
leucyl/phenylalanyl-trna--protein transferaseD884_01138Not AvailableNegative1252693 - 125337325281.3
s-dna-t family dna segregation atpase ftsk/spoiiieD884_01139Not AvailablePositive1253796 - 125637293769.8
outer membrane lipoprotein carrier proteinD884_01140Not AvailablePositive1256435 - 125705822861.4

Displaying genes 1271 – 1280 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.