Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence-associated abc transporter atp-binding protein sfbb | DXF93_02685 | Not Available | Negative | 554895 - 555911 | 36680.0 |
| metal abc transporter substrate-binding protein | DXF93_02690 | Not Available | Negative | 555969 - 556805 | 30043.2 |
| dna metabolism protein | DXF93_02695 | Not Available | Negative | 557071 - 557181 | 3901.66 |
| porin | DXF93_02700 | Not Available | Negative | 557214 - 558359 | 43238.2 |
| abc transporter permease | DXF93_02705 | Not Available | Negative | 558542 - 560956 | 88811.8 |
| abc transporter atp-binding protein | DXF93_02710 | Not Available | Negative | 560953 - 561639 | 24583.5 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | DXF93_02715 | Not Available | Positive | 561577 - 562233 | 24615.9 |
| sdr family oxidoreductase | DXF93_02720 | Not Available | Positive | 562262 - 563032 | 28047.2 |
| co-chaperone ybbn | DXF93_02725 | Not Available | Positive | 563091 - 563945 | 31782.0 |
| spfh/band 7/phb domain protein | DXF93_02730 | Not Available | Positive | 564031 - 564948 | 33587.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





