Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kila-n domain-containing protein | DXF93_29490 | Not Available | Negative | 5914425 - 5915036 | 22193.5 |
| rusa family crossover junction endodeoxyribonuclease | DXF93_29495 | Not Available | Negative | 5915136 - 5915516 | 14176.2 |
| dna methyltransferase | DXF93_29500 | Not Available | Negative | 5915513 - 5915714 | 7420.83 |
| hnh endonuclease | DXF93_29505 | Not Available | Negative | 5915867 - 5916775 | 34366.1 |
| hypothetical protein | DXF93_29510 | Not Available | Positive | 5917001 - 5917638 | 22044.2 |
| hypothetical protein | DXF93_29515 | Not Available | Positive | 5917642 - 5917842 | 7106.57 |
| hypothetical protein | DXF93_29520 | Not Available | Negative | 5918278 - 5919020 | 26302.8 |
| kila-n domain-containing protein | DXF93_29525 | Not Available | Negative | 5919516 - 5920180 | 24390.2 |
| rusa family crossover junction endodeoxyribonuclease | DXF93_29530 | Not Available | Negative | 5920279 - 5920659 | 14120.1 |
| type ii toxin-antitoxin system rele/pare family toxin | DXF93_29535 | Not Available | Positive | 5921204 - 5921533 | 12493.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





