Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | DXF93_28960 | Not Available | Negative | 5830408 - 5831946 | 57719.0 |
| is66 family insertion sequence hypothetical protein | DXF93_28965 | Not Available | Negative | 5831995 - 5832342 | 12797.9 |
| is66 family insertion sequence hypothetical protein | DXF93_28970 | Not Available | Negative | 5832339 - 5832743 | 15195.4 |
| dna-binding protein | DXF93_28975 | Not Available | Negative | 5832892 - 5833287 | 14845.7 |
| hypothetical protein | DXF93_28980 | Not Available | Negative | 5833296 - 5833544 | 8875.6 |
| xre family transcriptional regulator | DXF93_28985 | Not Available | Positive | 5833618 - 5834337 | 27196.8 |
| hypothetical protein | DXF93_28990 | Not Available | Positive | 5834591 - 5834995 | 14811.7 |
| hypothetical protein | DXF93_28995 | Not Available | Negative | 5834992 - 5835234 | 8904.63 |
| hypothetical protein | DXF93_29000 | Not Available | Positive | 5835456 - 5835674 | 8233.06 |
| hamp domain-containing protein | DXF93_29005 | Not Available | Positive | 5835793 - 5837475 | 61015.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





