Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein recx | DXF93_28280 | Not Available | Positive | 5725988 - 5727382 | 53501.8 |
| regulatory protein recx | DXF93_28285 | Not Available | Positive | 5727379 - 5727813 | 16758.2 |
| parb/repb/spo0j family plasmid partition protein | DXF93_28305 | Not Available | Negative | 5728852 - 5729823 | 35320.1 |
| plasmid-partitioning protein sopa | DXF93_28310 | Not Available | Negative | 5729823 - 5730989 | 43465.2 |
| replication initiation protein | DXF93_28315 | Not Available | Positive | 5731740 - 5732750 | 38339.1 |
| site-specific integrase | DXF93_28320 | Not Available | Negative | 5733448 - 5734188 | 27902.0 |
| serine/threonine protein kinase | DXF93_28325 | Not Available | Negative | 5734309 - 5734506 | 7828.47 |
| type ii toxin-antitoxin system pard family antitoxin | DXF93_28330 | Not Available | Negative | 5734837 - 5735085 | 9461.32 |
| transposase | DXF93_28335 | Not Available | Positive | 5735421 - 5735803 | 14752.8 |
| sugar kinase | DXF93_28340 | Not Available | Negative | 5735841 - 5735990 | 5777.93 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





