Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdf family zinc transporter zitb | DXF93_28205 | Not Available | Positive | 5717456 - 5718394 | 34696.8 |
| nicotinamide riboside transporter pnuc | DXF93_28210 | Not Available | Negative | 5718391 - 5719110 | 27007.8 |
| quinolinate synthase nada | DXF93_28215 | Not Available | Negative | 5719148 - 5720191 | 37950.8 |
| Trna-pseudo | Not Available | Not Available | Positive | 5720707 - 5720777 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 5720806 - 5720881 | Not Available |
| n-acetyltransferase | DXF93_28235 | Not Available | Positive | 5721117 - 5721614 | 18566.5 |
| stationary phase growth adaptation protein | DXF93_28240 | Not Available | Positive | 5722166 - 5722708 | 20774.7 |
| sos mutagenesis and repair protein umud | DXF93_28245 | Not Available | Negative | 5723016 - 5723396 | 14448.2 |
| dna polymerase v | DXF93_28250 | Not Available | Negative | 5723398 - 5723637 | 9437.94 |
| recombinase family protein | DXF93_28275 | Not Available | Positive | 5725327 - 5725911 | 21385.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





