Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traa | DXF93_28080 | Not Available | Negative | 5699954 - 5700346 | 13963.3 |
| arc family dna-binding protein | DXF93_28085 | Not Available | Positive | 5700557 - 5701177 | 24321.4 |
| hypothetical protein | DXF93_28090 | Not Available | Negative | 5701278 - 5701604 | 11716.3 |
| conjugal transfer protein | DXF93_28095 | Not Available | Negative | 5701721 - 5702110 | 14778.8 |
| lytic transglycosylase | DXF93_28100 | Not Available | Positive | 5702939 - 5703484 | 19938.9 |
| duf945 domain-containing protein | DXF93_28105 | Not Available | Negative | 5703501 - 5704322 | 31106.3 |
| hypothetical protein | DXF93_28110 | Not Available | Negative | 5704333 - 5704635 | 11106.0 |
| duf1281 domain-containing protein | DXF93_28125 | Not Available | Negative | 5706276 - 5707226 | 35053.9 |
| duf1738 domain-containing protein | DXF93_28130 | Not Available | Negative | 5707322 - 5708305 | 36565.3 |
| hypothetical protein | DXF93_28135 | Not Available | Negative | 5708377 - 5708988 | 23989.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





