Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXF93_27960 | Not Available | Negative | 5678682 - 5680415 | 63931.4 |
| acetamidase | DXF93_27965 | Not Available | Negative | 5680423 - 5681370 | 33757.1 |
| abc transporter substrate-binding protein | DXF93_27970 | Not Available | Negative | 5681415 - 5683019 | 58304.2 |
| abc transporter permease | DXF93_27975 | Not Available | Negative | 5683032 - 5683952 | 33209.9 |
| abc transporter permease | DXF93_27980 | Not Available | Negative | 5683952 - 5684800 | 30312.7 |
| antar domain-containing protein | DXF93_27985 | Not Available | Negative | 5684797 - 5685390 | 21873.9 |
| regulator | DXF93_27990 | Not Available | Negative | 5685387 - 5686514 | 41684.8 |
| integrase | DXF93_27995 | Not Available | Negative | 5686799 - 5686966 | 6312.53 |
| dna-binding protein | DXF93_28010 | Not Available | Positive | 5688409 - 5688690 | 10702.9 |
| hsp20/alpha crystallin family protein | DXF93_28015 | Not Available | Positive | 5688725 - 5689294 | 21507.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





