Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | DXF93_27855 | Not Available | Positive | 5660001 - 5661539 | 58004.7 |
| type vi secretion system baseplate subunit tssk | DXF93_27860 | Not Available | Positive | 5661557 - 5662894 | 49626.6 |
| dotu family type iv/vi secretion system protein | DXF93_27865 | Not Available | Positive | 5662891 - 5663556 | 25274.7 |
| ompa family protein | DXF93_27870 | Not Available | Positive | 5663569 - 5665221 | 60457.4 |
| hcp family type vi secretion system effector | DXF93_27875 | Not Available | Positive | 5665279 - 5665770 | 18678.9 |
| type vi secretion system atpase tssh | DXF93_27880 | Not Available | Positive | 5665961 - 5668606 | 97834.3 |
| hypothetical protein | DXF93_27885 | Not Available | Positive | 5668618 - 5668803 | 6943.19 |
| hypothetical protein | DXF93_27890 | Not Available | Positive | 5669219 - 5669476 | 9679.7 |
| hypothetical protein | DXF93_27895 | Not Available | Positive | 5669709 - 5671733 | 74346.8 |
| conjugation system sos inhibitor psib | DXF93_27900 | Not Available | Positive | 5671778 - 5672206 | 15634.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





