Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 import system permease lsrd | DXF93_02215 | Not Available | Positive | 460691 - 461668 | 34225.3 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | DXF93_02220 | Not Available | Positive | 461685 - 462698 | 36214.5 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | DXF93_02225 | Not Available | Positive | 462711 - 463598 | 32209.8 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | DXF93_02230 | Not Available | Positive | 463595 - 463888 | 11292.7 |
| putrescine aminotransferase | DXF93_02240 | Not Available | Negative | 464427 - 465896 | 53309.5 |
| pas domain s-box protein | DXF93_02245 | Not Available | Positive | 466240 - 467760 | 54754.4 |
| hamp domain-containing protein | DXF93_02250 | Not Available | Positive | 468214 - 469776 | 56843.0 |
| padr family transcriptional regulator | DXF93_02255 | Not Available | Negative | 469773 - 470372 | 22734.9 |
| siderophore-interacting protein | DXF93_02260 | Not Available | Positive | 470612 - 471382 | 28826.2 |
| dna repair protein | DXF93_02265 | Not Available | Negative | 471530 - 472699 | 45528.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





