Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 1-RC-17-04352 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 1-RC-17-04352
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 2 gtp cyclohydrolase i | DXF93_04830 | Not Available | Positive | 1012847 - 1013596 | 27381.5 |
| hypothetical protein | DXF93_04835 | Not Available | Positive | 1013854 - 1014552 | 25300.0 |
| type 1 fimbrial protein | DXF93_04840 | Not Available | Positive | 1014580 - 1015710 | 40309.5 |
| 5-oxoprolinase subunit pxpb | DXF93_04845 | Not Available | Positive | 1015836 - 1016492 | 24164.3 |
| allophanate hydrolase subunit 2 family protein | DXF93_04850 | Not Available | Positive | 1016486 - 1017418 | 34052.1 |
| 5-oxoprolinase subunit pxpa | DXF93_04855 | Not Available | Positive | 1017408 - 1018148 | 26232.5 |
| endonuclease viii | DXF93_04860 | Not Available | Positive | 1018161 - 1018952 | 29574.9 |
| citrate synthase | DXF93_04865 | Not Available | Negative | 1019039 - 1020325 | 48318.9 |
| hypothetical protein | DXF93_04870 | Not Available | Negative | 1020506 - 1020688 | 7083.87 |
| succinate dehydrogenase cytochrome b556 subunit | DXF93_04875 | Not Available | Positive | 1020978 - 1021367 | 14093.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





