Streptomyces sp. HB202

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. HB202 is a notable microbial strain characterized by the presence of flagella, which suggests motility capabilities that may play a role in its ecological interactions. This strain is associated with the marine sponge Halichondria panicea, indicating a specific host relationship that could be significant for both the sponge's ecology and the microbiome dynamics. The genomic structure of Streptomyces sp. HB202 includes a single replicon, which may reflect its genetic stability and adaptability within its niche. This genetic configuration can influence how the organism responds to environmental changes and interacts with its host. The accession number for Streptomyces sp. HB202 is QRAT00000000.1, which provides a reference point for researchers looking to access its genetic and taxonomic information. The insights gleaned from studying such strains can enhance our understanding of their roles in marine ecosystems, particularly in symbiotic relationships with marine invertebrates like sponges. Overall, the motility provided by flagella and the specific association with Halichondria panicea could suggest that Streptomyces sp. HB202 plays a crucial role in the health and biochemical processes within its marine environment. Further research could elucidate its contributions to nutrient cycling and its potential applications in biotechnology or natural product discovery.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. HB202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. HB202
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Halichondria panicea
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. HB202 Ga0265260_13, whole genome shotgun

Gene Summary

Adenine Count

1163315 bp

Thymine Count

1150647 bp

Guanine Count

2886727 bp

Cytosine Count

2898517 bp

Genome Length

8099206 bp

Protein-coding Genes

6844 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factor (sigma-70 family)DER30_3759Not AvailableNegative4121418 - 412340967823.6
tetr family transcriptional regulatorDER30_3760Not AvailableNegative4123629 - 412447428923.2
nadh dehydrogenaseDER30_3761Not AvailablePositive4124971 - 412636249736.6
histidine kinase-like proteinDER30_3762Not AvailablePositive4126675 - 412833958716.3
na+/melibiose symporter-like transporterDER30_3763Not AvailableNegative4128378 - 412972445564.4
dna-binding marr family transcriptional regulatorDER30_3764Not AvailablePositive4129845 - 413040220667.5
16s ribosomal rnaNot AvailableNot AvailablePositive4131074 - 4132603Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive4132895 - 4136021Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive4136100 - 4136216Not Available
luxr family two component transcriptional regulatorDER30_3768Not AvailableNegative4136267 - 413693224154.4

Displaying genes 3571 – 3580 of 6936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001988(R)-mevalonateC6H11O4Chemical structure of (R)-mevalonateNot available
Average147.1491Da
Monoisotopic147.0657338Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.