Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212 is characterized as a rod-shaped bacterium, which indicates its elongated morphology typical of many members within the Sphingomonas genus. This strain possesses flagella, suggesting that it is motile and capable of moving through its environment, which may be advantageous for colonization and interaction with various substrates. The genomic structure of Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212 consists of a single replicon, indicating a streamlined genetic organization which can facilitate efficient replication and potentially contribute to its adaptability in different environments. The strain is documented under the accession number QQWY00000000.1, providing a reference for researchers seeking to access its genomic data for further studies. In the context of ecological insight, the mobility conferred by flagella may enable Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212 to thrive in diverse habitats, including soil and aquatic systems where it may play a role in biogeochemical cycles. Given the ecological versatility of many Sphingomonas species, this strain could contribute to the degradation of pollutants and organic materials, highlighting its potential significance in environmental microbiology and biotechnology applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. ABOLE
Strainstrain S-NIH.Pt18_1212

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. ABOLE strain S-NIH.Pt18_1212 NODE_126, whole

Gene Summary

Adenine Count

836411 bp

Thymine Count

837145 bp

Guanine Count

1711536 bp

Cytosine Count

1709665 bp

Genome Length

5094757 bp

Protein-coding Genes

4603 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 4,5-dioxygenase subunit alphaCA234_07150Not AvailableNegative1506985 - 150738915430.4
amidohydrolaseCA234_07155Not AvailableNegative1507386 - 150841137969.5
nad(p)-dependent oxidoreductaseCA234_07160Not AvailableNegative1508408 - 150928029751.8
lysr family transcriptional regulatorCA234_07165Not AvailableNegative1509345 - 151050240735.9
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseCA234_07170Not AvailablePositive1510603 - 151127723295.1
4-oxalomesaconate tautomeraseCA234_07175Not AvailablePositive1511479 - 151253136564.1
2-pyrone-4,6-dicarboxylate hydrolaseCA234_07180Not AvailablePositive1512528 - 151340332080.5
polysaccharide pyruvyl transferase family proteinCA234_07185Not AvailablePositive1513530 - 151464540672.5
coenzyme f420 hydrogenaseCA234_07190Not AvailablePositive1514572 - 151600251570.3
manganese catalase family proteinCA234_07195Not AvailableNegative1516045 - 151694732164.6

Displaying genes 1501 – 1510 of 4723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.