Sphingomonas sp. ABOLF strain S-NIH.Pt19_1214

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. ABOLF strain S-NIH.Pt19_1214 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it has the ability to move in liquid environments. This motility can be an important trait for adaptation and survival in various ecological niches. The strain possesses a single replicon, indicating a simplified genetic structure that may contribute to its metabolic efficiency and adaptability. The strain is cataloged under the accession number QQWX00000000.1, which provides a reference for researchers seeking to explore its genomic features and potential applications in biotechnology or environmental microbiology. Understanding the genetic makeup of Sphingomonas sp. ABOLF could reveal insights into its metabolic pathways and interactions within its ecosystem. In ecological contexts, members of the Sphingomonas genus are known for their ability to degrade a variety of organic compounds, including pollutants. This trait is significant for bioremediation efforts, where such bacteria can be utilized to clean up contaminated environments. The presence of flagella enhances their ability to navigate towards nutrient sources or away from harmful substances, potentially increasing their effectiveness in bioremediation processes. In summary, Sphingomonas sp. ABOLF strain S-NIH.Pt19_1214's rod shape and flagellar motility, combined with its genomic characteristics, position it as a potentially valuable organism for ecological studies and applications in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. ABOLF
Strainstrain S-NIH.Pt19_1214

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. ABOLF strain S-NIH.Pt19_1214
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. ABOLF strain S-NIH.Pt19_1214 NODE_93, whole

Gene Summary

Adenine Count

658371 bp

Thymine Count

652412 bp

Guanine Count

1357220 bp

Cytosine Count

1379355 bp

Genome Length

4047358 bp

Protein-coding Genes

3625 genes

Non-Coding Genes

192 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinCA235_01940Not AvailableNegative416417 - 41684515181.2
holliday junction branch migration protein ruvaCA235_01945Not AvailableNegative416949 - 41755120201.6
crossover junction endodeoxyribonuclease ruvcCA235_01950Not AvailableNegative417548 - 41805417200.9
yebc/pmpr family dna-binding transcriptional regulatorCA235_01955Not AvailableNegative418197 - 41894026552.1
duf2312 domain-containing proteinCA235_01960Not AvailableNegative419087 - 4193239179.08
duf1244 domain-containing proteinCA235_01965Not AvailableNegative419418 - 41973511958.1
pyruvate kinaseCA235_01970Not AvailablePositive419807 - 42127352833.2
had family phosphataseCA235_01975Not AvailableNegative421369 - 42200123045.2
50s ribosomal protein l36CA235_01980Not AvailableNegative422015 - 4221405051.3
duf4136 domain-containing proteinCA235_01985Not AvailablePositive422294 - 42291121349.4

Displaying genes 601 – 610 of 3817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.