Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. ABOLF |
| Strain | strain S-NIH.Pt19_1214 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
658371 bp
Thymine Count
652412 bp
Guanine Count
1357220 bp
Cytosine Count
1379355 bp
Genome Length
4047358 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | CA235_16915 | Not Available | Positive | 3585617 - 3586189 | 20236.3 |
| site-2 protease family protein | CA235_16920 | Not Available | Positive | 3586379 - 3587065 | 24345.7 |
| trna pseudouridine(55) synthase trub | CA235_16925 | Not Available | Positive | 3587067 - 3587960 | 31051.4 |
| 30s ribosomal protein s15 | CA235_16930 | Not Available | Positive | 3587972 - 3588241 | 10238.4 |
| polyribonucleotide nucleotidyltransferase | CA235_16935 | Not Available | Positive | 3588492 - 3590831 | 84705.1 |
| duf4118 domain-containing protein | CA235_16940 | Not Available | Positive | 3590974 - 3591981 | 36472.3 |
| duf4440 domain-containing protein | CA235_16945 | Not Available | Positive | 3592050 - 3592418 | 13949.2 |
| Tmrna,resume consensus sequence (at 199): cacaagtgccaacgataa | Not Available | Not Available | Positive | 3592448 - 3592779 | Not Available |
| rrf2 family transcriptional regulator | CA235_16955 | Not Available | Positive | 3592856 - 3593287 | 15429.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CA235_16960 | Not Available | Negative | 3593343 - 3594398 | 37165.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
