Dyella solisilvae strain DHG54

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella solisilvae strain DHG54 is a Gram-negative bacterium characterized by its rod shape. This strain has been classified under the genus Dyella, which is part of the family Oxalobacteraceae. Notably, Dyella solisilvae strain DHG54 possesses a single replicon in its genome, indicating a streamlined genetic organization. The accession number for the genomic data of strain DHG54 is QQSY00000000.1, which serves as a reference for researchers seeking to study its genetic makeup further. The identification of this strain contributes to the understanding of the diversity within the Dyella genus, which is known for its metabolic versatility and potential ecological roles. From a biological and ecological perspective, the classification of Dyella solisilvae strain DHG54 as a Gram-negative rod suggests that it may play a role in various environmental processes, including nutrient cycling and interactions with other microorganisms. As a member of the Oxalobacteraceae family, it may be involved in the degradation of organic compounds, contributing to soil health and ecosystem functioning. The characteristics of this strain highlight its potential significance in microbiological research and environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella solisilvae
Strainstrain DHG54

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella solisilvae strain DHG54 scaffold17, whole genome shotgun

Gene Summary

Adenine Count

800400 bp

Thymine Count

792951 bp

Guanine Count

1491311 bp

Cytosine Count

1514731 bp

Genome Length

4601888 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp phosphoribosyltransferaseDVT68_14440Not AvailablePositive3301922 - 330281532388.6
histidinol dehydrogenaseDVT68_14445Not AvailablePositive3302844 - 330415145489.0
histidinol-phosphate transaminaseDVT68_14450Not AvailablePositive3304148 - 330525439066.4
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbDVT68_14455Not AvailablePositive3305251 - 330631539396.2
imidazole glycerol phosphate synthase subunit hishDVT68_14460Not AvailablePositive3306315 - 330690521043.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDVT68_14465Not AvailablePositive3306902 - 330763026061.9
imidazole glycerol phosphate synthase subunit hisfDVT68_14470Not AvailablePositive3307624 - 330839427774.2
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieDVT68_14475Not AvailablePositive3308496 - 330912822539.8
pyridine nucleotide-disulfide oxidoreductaseDVT68_14480Not AvailablePositive3309461 - 331087050824.0
sulfate abc transporter substrate-binding proteinDVT68_14485Not AvailablePositive3310991 - 331199236348.2

Displaying genes 2871 – 2880 of 4011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.