Dyella solisilvae strain DHG54

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella solisilvae strain DHG54 is a Gram-negative bacterium characterized by its rod shape. This strain has been classified under the genus Dyella, which is part of the family Oxalobacteraceae. Notably, Dyella solisilvae strain DHG54 possesses a single replicon in its genome, indicating a streamlined genetic organization. The accession number for the genomic data of strain DHG54 is QQSY00000000.1, which serves as a reference for researchers seeking to study its genetic makeup further. The identification of this strain contributes to the understanding of the diversity within the Dyella genus, which is known for its metabolic versatility and potential ecological roles. From a biological and ecological perspective, the classification of Dyella solisilvae strain DHG54 as a Gram-negative rod suggests that it may play a role in various environmental processes, including nutrient cycling and interactions with other microorganisms. As a member of the Oxalobacteraceae family, it may be involved in the degradation of organic compounds, contributing to soil health and ecosystem functioning. The characteristics of this strain highlight its potential significance in microbiological research and environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella solisilvae
Strainstrain DHG54

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella solisilvae strain DHG54 scaffold17, whole genome shotgun

Gene Summary

Adenine Count

800400 bp

Thymine Count

792951 bp

Guanine Count

1491311 bp

Cytosine Count

1514731 bp

Genome Length

4601888 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homogentisate 1,2-dioxygenaseDVT68_06780Not AvailableNegative1542703 - 154400447991.7
endonuclease domain-containing proteinDVT68_06785Not AvailableNegative1544024 - 154440714591.5
4-hydroxyphenylpyruvate dioxygenaseDVT68_06790Not AvailableNegative1544474 - 154554739838.4
marr family transcriptional regulatorDVT68_06795Not AvailablePositive1545653 - 154614118458.2
mfs transporterDVT68_06800Not AvailableNegative1546311 - 154781655112.8
mfs transporterDVT68_06805Not AvailableNegative1547961 - 154946955013.4
tryptophan 2,3-dioxygenaseDVT68_06810Not AvailableNegative1549657 - 155050532899.6
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaDVT68_06815Not AvailablePositive1550718 - 155180340082.5
alpha-ketoacid dehydrogenase subunit betaDVT68_06820Not AvailablePositive1551807 - 155278735509.6
2-oxo acid dehydrogenase subunit e2DVT68_06825Not AvailablePositive1552911 - 155429648036.4

Displaying genes 1351 – 1360 of 4011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.