Nocardia pseudobrasiliensis strain DSM 44290

microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia pseudobrasiliensis strain DSM 44290 is a microaerophilic bacterium, indicating that it requires reduced levels of oxygen for optimal growth. This strain is capable of thriving at an optimal temperature of 37°C, which falls within the mesophilic temperature range, making it well-suited to environments that support moderate temperatures. The presence of flagella suggests that N. pseudobrasiliensis has motility, which may play a role in its ecological interactions and potential pathogenicity. This motility could facilitate the bacterium's movement towards nutrient sources or away from unfavorable conditions, enhancing its survival and adaptability. With a single replicon, this strain exhibits a streamlined genetic structure that may contribute to its efficiency in replication and adaptation to its environment. The genomic data for N. pseudobrasiliensis can be referenced through the accession number QQBC00000000.1, providing a resource for further genomic studies. The ecological significance of Nocardia pseudobrasiliensis lies in its potential roles in soil ecosystems and its interactions with other microorganisms. As a member of the Nocardia genus, it may participate in the degradation of organic matter and influence nutrient cycling in its habitat. Understanding its oxygen requirements, temperature preferences, and motility can provide insights into its ecological niche and its potential impact on soil health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia pseudobrasiliensis
Strainstrain DSM 44290

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardia pseudobrasiliensis strain DSM 44290 Ga0244499_139, whole

Gene Summary

Adenine Count

1370291 bp

Thymine Count

1375085 bp

Guanine Count

2825025 bp

Cytosine Count

2836286 bp

Genome Length

8407941 bp

Protein-coding Genes

7906 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deazaflavin-dependent oxidoreductase (nitroreductase family)DFR76_107463Not AvailableNegative5025520 - 502595116090.1
thimet oligopeptidaseDFR76_107464Not AvailablePositive5026020 - 502794872188.0
hypothetical proteinDFR76_107465Not AvailablePositive5028009 - 502873727394.4
parallel beta helix pectate lyase-like proteinDFR76_107466Not AvailablePositive5028937 - 503044851251.5
pa domain-containing proteinDFR76_107467Not AvailableNegative5030453 - 503191950956.8
hypothetical proteinDFR76_107468Not AvailablePositive5032147 - 503253313124.7
pyridoxamine 5'-phosphate oxidaseDFR76_107469Not AvailableNegative5032481 - 503277710523.6
drug/metabolite transporter (dmt)-like permeaseDFR76_107470Not AvailableNegative5032809 - 503372631584.3
dna-binding transcriptional lysr family regulatorDFR76_107471Not AvailablePositive5033801 - 503471232485.2
2-polyprenyl-6-methoxyphenol hydroxylase-like fad-dependent oxidoreductaseDFR76_107472Not AvailableNegative5034673 - 503609151637.0

Displaying genes 4881 – 4890 of 8008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.