Enterococcus faecalis strain 13-9-88

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Enterococcus

Description

Enterococcus faecalis strain 13-9-88 is a Gram-positive, cocci-shaped bacterium classified as a facultative anaerobe. It is a chemoorganotroph, meaning it derives energy from organic compounds. The optimal growth temperature for this strain is 37°C, and it falls within the mesophilic temperature range. Notably, this strain possesses one membrane and a single replicon, indicating a relatively simple genomic structure. E. faecalis strain 13-9-88 is non-motile and does not possess flagella. This strain has a diverse habitat, being free-living and associated with various hosts, including humans (Homo sapiens), domestic animals such as dogs (Canis lupus familiaris) and cats (Felis catus), as well as aquatic species like Lutjanus russellii and Danio rerio. Its pathogenicity in humans is significant, as it is linked to numerous health issues, including bacteremia, urinary tract infections (UTIs), endocarditis, meningitis, and various nosocomial infections. The strain has been implicated in infections across different body parts, such as the urinary tract, intra-abdomen, and oral cavity, highlighting its potential to cause a wide range of clinical conditions, including septicemia and infections in surgical sites. The ecological insight of E. faecalis strain 13-9-88 lies in its ability to persist in various environments and infect multiple host species, suggesting its adaptability and resilience in both natural and clinical settings. This trait may contribute to its role in antibiotic resistance and its prevalence in healthcare-associated infections, underscoring the importance of monitoring and understanding this strain in microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus faecalis
Strainstrain 13-9-88

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Enterococcus faecalis strain 13-9-88
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementChains
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Enterococcus faecalis strain 13-9-88

Gene Summary

Adenine Count

887602 bp

Thymine Count

914601 bp

Guanine Count

520397 bp

Cytosine Count

559965 bp

Genome Length

2882745 bp

Protein-coding Genes

2733 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 5-dehydrogenaseDVY57_07955Not AvailableNegative1637437 - 163822528206.0
5-dehydro-4-deoxy-d-glucuronate isomeraseDVY57_07960Not AvailableNegative1638247 - 163907731746.7
sugar kinaseDVY57_07965Not AvailableNegative1639099 - 164010636900.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDVY57_07970Not AvailableNegative1640111 - 164075822664.8
iclr family transcriptional regulatorDVY57_07980Not AvailableNegative1640919 - 164167128058.9
merr family transcriptional regulatorDVY57_07985Not AvailableNegative1641802 - 164225717639.1
mfs transporterDVY57_07990Not AvailablePositive1642370 - 164388754441.7
duf4811 domain-containing proteinDVY57_07995Not AvailablePositive1643887 - 164459126475.9
abc transporter permeaseDVY57_08000Not AvailableNegative1644646 - 164587544522.4
abc transporter atp-binding proteinDVY57_08005Not AvailableNegative1645872 - 164658226629.3

Displaying genes 1701 – 1710 of 2901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
EndophthalmitisCausesPMC10638747
Refractory apical periodontitisCausesPMC11307051
Infections in various body parts such as urinary tract, intra-abdomen and pelvic regions, surgical sites and oral cavityCausesPMC11307051
EndocarditisCausesPMC11784074
Bloodstream infectionsCausesPMC11784074
Urinary tract infectionsCausesPMC11784074
MastitisCausesPMC13343983
PyelonephritisCausesPMC4308012
Various infectionsCausesPMC5109407
MeningitisCausesPMC5109407

Displaying health effects 1 – 10 of 47 in total