Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter atp-binding protein | DU478_15430 | Not Available | Negative | 3316216 - 3317226 | 36341.2 |
| choline abc transporter permease subunit | DU478_15435 | Not Available | Negative | 3317223 - 3318059 | 30247.0 |
| hypothetical protein | DU478_15440 | Not Available | Negative | 3318047 - 3318745 | 25084.9 |
| choline abc transporter substrate-binding protein | DU478_15445 | Not Available | Negative | 3318799 - 3319722 | 32454.7 |
| atp phosphoribosyltransferase | DU478_15450 | Not Available | Negative | 3320265 - 3320981 | 26194.3 |
| atp phosphoribosyltransferase regulatory subunit | DU478_15455 | Not Available | Negative | 3320978 - 3322144 | 42266.3 |
| histidine--trna ligase | DU478_15460 | Not Available | Negative | 3322066 - 3323532 | 53401.6 |
| slyx protein | DU478_15465 | Not Available | Positive | 3323735 - 3323938 | 7660.02 |
| dna polymerase iii subunit alpha | DU478_15470 | Not Available | Negative | 3323954 - 3327502 | 129980.0 |
| arsr family transcriptional regulator | DU478_15475 | Not Available | Positive | 3327620 - 3327949 | 12491.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
