Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-5-aminohexanoate cleavage protein | DU478_10315 | Not Available | Negative | 2213193 - 2214035 | 30352.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | DU478_10320 | Not Available | Negative | 2214044 - 2214643 | 21503.3 |
| protocatechuate 3,4-dioxygenase subunit beta | DU478_10325 | Not Available | Negative | 2214646 - 2215383 | 27558.6 |
| alpha/beta fold hydrolase | DU478_10330 | Not Available | Negative | 2215501 - 2216913 | 49887.6 |
| lysr family transcriptional regulator | DU478_10335 | Not Available | Negative | 2217012 - 2217932 | 32574.8 |
| tripartite tricarboxylate transporter substrate binding protein | DU478_10340 | Not Available | Positive | 2218069 - 2219019 | 33311.4 |
| tripartite tricarboxylate transporter tctb family protein | DU478_10345 | Not Available | Positive | 2219025 - 2219525 | 17908.7 |
| hypothetical protein | DU478_10350 | Not Available | Positive | 2219530 - 2221041 | 52540.0 |
| gamma-glutamyltransferase family protein | DU478_10355 | Not Available | Positive | 2221041 - 2222636 | 55165.3 |
| dna-binding response regulator | DU478_10360 | Not Available | Positive | 2222902 - 2223573 | 24627.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
