Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | DU478_09810 | Not Available | Positive | 2107947 - 2108372 | 15985.3 |
| pdz domain-containing protein | DU478_09815 | Not Available | Positive | 2108494 - 2109885 | 48780.4 |
| replication-associated recombination protein a | DU478_09820 | Not Available | Positive | 2109890 - 2111197 | 47727.9 |
| multicopper oxidase family protein | DU478_09825 | Not Available | Negative | 2111258 - 2112640 | 49167.6 |
| fluoride efflux transporter crcb | DU478_09830 | Not Available | Positive | 2112750 - 2113127 | 12393.5 |
| rlua family pseudouridine synthase | DU478_09835 | Not Available | Positive | 2113124 - 2114164 | 38097.9 |
| had family hydrolase | DU478_09840 | Not Available | Positive | 2114164 - 2114847 | 24172.3 |
| atpase | DU478_09845 | Not Available | Positive | 2114844 - 2115554 | 26307.8 |
| amino acid abc transporter substrate-binding protein | DU478_09850 | Not Available | Positive | 2115759 - 2116775 | 35612.8 |
| abc transporter permease subunit | DU478_09855 | Not Available | Positive | 2116902 - 2118116 | 44132.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
