Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | DU478_09305 | Not Available | Positive | 2016729 - 2017466 | 25892.9 |
| amino acid abc transporter permease | DU478_09310 | Not Available | Positive | 2017528 - 2018184 | 24067.4 |
| amino acid abc transporter atp-binding protein | DU478_09315 | Not Available | Positive | 2018181 - 2018912 | 27047.6 |
| fad-binding oxidoreductase | DU478_09320 | Not Available | Positive | 2018925 - 2020181 | 44308.2 |
| nucleoside hydrolase | DU478_09325 | Not Available | Positive | 2020521 - 2021462 | 33371.0 |
| hypothetical protein | DU478_09330 | Not Available | Positive | 2021485 - 2022021 | 18494.3 |
| gnat family n-acetyltransferase | DU478_09335 | Not Available | Positive | 2022066 - 2022512 | 16176.5 |
| ydiu family protein | DU478_09345 | Not Available | Positive | 2023014 - 2024435 | 51460.9 |
| dmt family transporter | DU478_09350 | Not Available | Negative | 2024566 - 2025456 | 31368.2 |
| zinc transporter zntb | DU478_09355 | Not Available | Positive | 2025104 - 2026543 | 51722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
