Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | DU478_08900 | Not Available | Negative | 1925966 - 1927090 | 41476.4 |
| pbp1a family penicillin-binding protein | DU478_08905 | Not Available | Negative | 1927319 - 1929868 | 93399.5 |
| n-acetylmuramoyl-l-alanine amidase | DU478_08910 | Not Available | Negative | 1929988 - 1931205 | 42791.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DU478_08915 | Not Available | Negative | 1931274 - 1932416 | 41081.1 |
| peptidase m48 | DU478_08920 | Not Available | Positive | 1932486 - 1933805 | 46405.9 |
| dsba family protein | DU478_08925 | Not Available | Positive | 1933826 - 1934572 | 26717.3 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DU478_08930 | Not Available | Negative | 1934777 - 1935907 | 40162.2 |
| helix-turn-helix domain-containing protein | DU478_08935 | Not Available | Negative | 1936005 - 1937267 | 44666.6 |
| 5-aminolevulinate synthase | DU478_08940 | Not Available | Negative | 1937394 - 1938617 | 44453.2 |
| 5-aminolevulinate synthase | DU478_08945 | Not Available | Positive | 1938922 - 1939251 | 11057.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
