Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | DU478_07545 | Not Available | Positive | 1606344 - 1607069 | 27395.7 |
| phosphatidate cytidylyltransferase | DU478_07550 | Not Available | Positive | 1607066 - 1607854 | 27212.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DU478_07555 | Not Available | Positive | 1607851 - 1609029 | 41432.0 |
| rip metalloprotease rsep | DU478_07560 | Not Available | Positive | 1609034 - 1610377 | 47716.5 |
| outer membrane protein assembly factor bama | DU478_07565 | Not Available | Positive | 1610808 - 1613078 | 84435.5 |
| omph family outer membrane protein | DU478_07570 | Not Available | Positive | 1613078 - 1613671 | 21522.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DU478_07575 | Not Available | Positive | 1613732 - 1614193 | 16845.9 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DU478_07580 | Not Available | Positive | 1614196 - 1614975 | 27467.1 |
| lpxi family protein | DU478_07585 | Not Available | Positive | 1614983 - 1615879 | 30801.0 |
| lipid-a-disaccharide synthase | DU478_07590 | Not Available | Positive | 1615879 - 1617045 | 41437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
