Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin transporter bioy | DU478_06720 | Not Available | Positive | 1438302 - 1438907 | 20872.3 |
| nucleoside triphosphate pyrophosphohydrolase | DU478_06725 | Not Available | Negative | 1439246 - 1440052 | 30005.3 |
| amidohydrolase | DU478_06730 | Not Available | Positive | 1440116 - 1441273 | 41110.8 |
| agmatinase | DU478_06735 | Not Available | Positive | 1441390 - 1442364 | 34673.9 |
| duf1499 domain-containing protein | DU478_06740 | Not Available | Positive | 1442429 - 1442839 | 15119.3 |
| peptide chain release factor 1 | DU478_06745 | Not Available | Positive | 1442880 - 1443929 | 38511.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | DU478_06750 | Not Available | Positive | 1443926 - 1444771 | 29891.1 |
| duf4167 domain-containing protein | DU478_06755 | Not Available | Positive | 1444986 - 1445645 | 23887.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DU478_06760 | Not Available | Negative | 1445657 - 1446499 | 30422.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DU478_06765 | Not Available | Negative | 1446574 - 1447554 | 34258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
