Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thalassococcus profundi strain WRAS1
Accession NumberQPMK00000000.1
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hcp1 family type vi secretion system effector | DU478_20690 | Not Available | - | 4400397 - 4400885 | 17643.0 |
| type vi secretion system contractile sheath large subunit | DU478_20695 | Not Available | - | 4400918 - 4402426 | 55698.1 |
| type vi secretion system contractile sheath small subunit | DU478_20700 | Not Available | - | 4402430 - 4402963 | 19682.5 |
| type vi secretion system protein tssa | DU478_20705 | Not Available | - | 4402998 - 4404137 | 40259.7 |
| duf4384 domain-containing protein | DU478_20710 | Not Available | - | 4404266 - 4405903 | 55809.6 |
| biopolymer transporter exbd | DU478_20715 | Not Available | - | 4405900 - 4406301 | 14012.2 |
| biopolymer transporter exbd | DU478_20720 | Not Available | - | 4406298 - 4406705 | 13826.3 |
| mota/tolq/exbb proton channel family protein | DU478_20725 | Not Available | - | 4406702 - 4407328 | 21194.3 |
| hypothetical protein | DU478_20730 | Not Available | - | 4407332 - 4407748 | 14600.8 |
| hypothetical protein | DU478_20735 | Not Available | + | 4407943 - 4408365 | 15049.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.