Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DU478_18170 | Not Available | Positive | 3890477 - 3890995 | 19118.8 |
| hypothetical protein | DU478_18175 | Not Available | Positive | 3890992 - 3891675 | 24047.6 |
| transcription antitermination factor nusb | DU478_18180 | Not Available | Negative | 3891840 - 3892325 | 18398.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | DU478_18185 | Not Available | Negative | 3892322 - 3892873 | 19089.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DU478_18190 | Not Available | Negative | 3892873 - 3894000 | 40923.9 |
| hypothetical protein | DU478_18195 | Not Available | Negative | 3894112 - 3894444 | 12325.0 |
| hypothetical protein | DU478_18200 | Not Available | Positive | 3894564 - 3895490 | 33871.0 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DU478_18205 | Not Available | Negative | 3895487 - 3896269 | 27849.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 3896403 - 3896486 | Not Available |
| duf4147 domain-containing protein | DU478_18210 | Not Available | Positive | 3896687 - 3897937 | 42630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
