Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DU478_12520 | Not Available | Negative | 2683296 - 2683970 | 25215.9 |
| shikimate dehydrogenase | DU478_12525 | Not Available | Positive | 2684090 - 2684953 | 30232.4 |
| sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein | DU478_12530 | Not Available | Positive | 2684959 - 2686842 | 68808.0 |
| c4-dicarboxylate abc transporter | DU478_12535 | Not Available | Positive | 2686927 - 2687919 | 35968.2 |
| trap transporter small permease | DU478_12540 | Not Available | Positive | 2687985 - 2688512 | 20006.4 |
| trap transporter large permease | DU478_12545 | Not Available | Positive | 2688509 - 2689804 | 45668.7 |
| 3-dehydroquinate dehydratase | DU478_12550 | Not Available | Positive | 2689821 - 2690258 | 16117.4 |
| acetyl-coenzyme a synthetase | DU478_12555 | Not Available | Positive | 2690688 - 2690977 | 10644.8 |
| adenylate kinase | DU478_12560 | Not Available | Positive | 2690983 - 2691669 | 24421.1 |
| duf4212 domain-containing protein | DU478_12565 | Not Available | Positive | 2691707 - 2691994 | 10820.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
