Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | DU478_12035 | Not Available | Positive | 2582723 - 2583541 | 28429.1 |
| abc transporter atp-binding protein | DU478_12040 | Not Available | Positive | 2583538 - 2584995 | 50533.1 |
| duf2796 domain-containing protein | DU478_12045 | Not Available | Positive | 2585039 - 2585692 | 23657.7 |
| 4fe-4s binding protein | DU478_12050 | Not Available | Positive | 2585920 - 2588043 | 77081.6 |
| fad:protein fmn transferase | DU478_12055 | Not Available | Positive | 2588040 - 2588924 | 30302.5 |
| amino acid abc transporter substrate-binding protein | DU478_12060 | Not Available | Negative | 2588963 - 2589862 | 32689.5 |
| cytochrome c-550 pedf | DU478_12065 | Not Available | Negative | 2589900 - 2590568 | 23137.6 |
| branched-chain amino acid abc transporter substrate-binding protein | DU478_12070 | Not Available | Positive | 2590792 - 2591952 | 41547.1 |
| hypothetical protein | DU478_12075 | Not Available | Positive | 2591934 - 2592917 | 35746.9 |
| sel1 repeat family protein | DU478_12080 | Not Available | Positive | 2592985 - 2593542 | 19752.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
