Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | DU478_11280 | Not Available | Positive | 2399891 - 2400736 | 30326.6 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein | DU478_11285 | Not Available | Negative | 2400871 - 2402148 | 46352.1 |
| duf2125 domain-containing protein | DU478_11290 | Not Available | Negative | 2402216 - 2403166 | 34236.8 |
| gamma-glutamylcyclotransferase | DU478_11295 | Not Available | Positive | 2403232 - 2403762 | 19339.0 |
| biopolymer transporter exbb | DU478_11300 | Not Available | Positive | 2403899 - 2405080 | 42659.7 |
| peptidoglycan -binding protein | DU478_11305 | Not Available | Positive | 2405084 - 2407249 | 77853.6 |
| m23 family peptidase | DU478_11310 | Not Available | Negative | 2407287 - 2408249 | 34067.8 |
| atp-dependent clp protease atp-binding subunit clpa | DU478_11315 | Not Available | Negative | 2408249 - 2410576 | 84861.4 |
| hydroxyacylglutathione hydrolase | DU478_11320 | Not Available | Negative | 2410733 - 2411500 | 27655.4 |
| methyltransferase domain-containing protein | DU478_11325 | Not Available | Positive | 2411562 - 2412311 | 27713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
