Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DU478_09610 | Not Available | Negative | 2081758 - 2083485 | 63672.4 |
| rna polymerase sigma factor | DU478_09615 | Not Available | Negative | 2083490 - 2084047 | 20300.1 |
| response regulator | DU478_09620 | Not Available | Positive | 2084333 - 2085133 | 28574.8 |
| duf1328 domain-containing protein | DU478_09625 | Not Available | Negative | 2085247 - 2085411 | 5848.68 |
| pldc_n domain-containing protein | DU478_09630 | Not Available | Negative | 2085433 - 2085621 | 6726.62 |
| pepsy domain-containing protein | DU478_09635 | Not Available | Positive | 2085811 - 2086065 | 9065.58 |
| trap transporter large permease | DU478_09640 | Not Available | Negative | 2086168 - 2087571 | 49668.2 |
| trap transporter small permease | DU478_09645 | Not Available | Negative | 2087571 - 2088200 | 23111.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | DU478_09650 | Not Available | Negative | 2088277 - 2089290 | 36902.0 |
| acetyl-coenzyme a synthetase | DU478_09655 | Not Available | Positive | 2089753 - 2090098 | 13010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
