Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | DU478_08750 | Not Available | Positive | 1893132 - 1894169 | 37142.6 |
| trap transporter small permease | DU478_08755 | Not Available | Positive | 1894277 - 1894762 | 17240.8 |
| trap transporter large permease | DU478_08760 | Not Available | Positive | 1894755 - 1896083 | 46480.9 |
| feruloyl-coa synthase | DU478_08765 | Not Available | Negative | 1896100 - 1897887 | 63628.7 |
| sdr family nad(p)-dependent oxidoreductase | DU478_08770 | Not Available | Negative | 1897912 - 1898676 | 25764.2 |
| marr family transcriptional regulator | DU478_08775 | Not Available | Negative | 1898676 - 1899158 | 17398.0 |
| nadp-dependent isocitrate dehydrogenase | DU478_08780 | Not Available | Positive | 1899488 - 1901695 | 79667.2 |
| pin domain-containing protein | DU478_08785 | Not Available | Negative | 1902016 - 1902558 | 19227.2 |
| class i sam-dependent rrna methyltransferase | DU478_08790 | Not Available | Negative | 1902555 - 1903775 | 42133.6 |
| hypothetical protein | DU478_08795 | Not Available | Negative | 1903838 - 1904449 | 21794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
