Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | DU478_07445 | Not Available | Negative | 1580753 - 1581679 | 34043.8 |
| hypothetical protein | DU478_07450 | Not Available | Negative | 1581676 - 1583238 | 55637.5 |
| shikimate kinase | DU478_07455 | Not Available | Positive | 1583479 - 1584057 | 21161.8 |
| 3-dehydroquinate synthase | DU478_07460 | Not Available | Positive | 1584054 - 1585166 | 39813.0 |
| cytochrome p450 | DU478_07465 | Not Available | Positive | 1585284 - 1586459 | 43916.4 |
| (2fe-2s)-binding protein | DU478_07470 | Not Available | Positive | 1586489 - 1586812 | 11464.5 |
| pyridine nucleotide-disulfide oxidoreductase | DU478_07475 | Not Available | Positive | 1586816 - 1587985 | 40910.8 |
| duf4114 domain-containing protein | DU478_07480 | Not Available | Positive | 1588166 - 1593187 | 173739.0 |
| hypothetical protein | DU478_07485 | Not Available | Positive | 1593198 - 1593683 | 17133.7 |
| single-stranded dna-binding protein | DU478_07490 | Not Available | Negative | 1593699 - 1594211 | 18190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
