Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Thalassococcus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Thalassococcus |
| Species | Thalassococcus profundi |
| Strain | strain WRAS1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
823860 bp
Thymine Count
821882 bp
Guanine Count
1566886 bp
Cytosine Count
1573141 bp
Genome Length
4785947 bp
Protein-coding Genes
4312 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU478_05390 | Not Available | Negative | 1146793 - 1150839 | 141553.0 |
| crispr-associated endonuclease cas1 | DU478_05395 | Not Available | Positive | 1153067 - 1155007 | 70711.8 |
| crispr-associated endonuclease cas2 | DU478_05400 | Not Available | Positive | 1155631 - 1155921 | 10530.7 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | DU478_05405 | Not Available | Positive | 1156448 - 1157296 | 30095.6 |
| hypothetical protein | DU478_05410 | Not Available | Positive | 1157329 - 1159272 | 71985.7 |
| hypothetical protein | DU478_05415 | Not Available | Positive | 1159269 - 1161182 | 69253.6 |
| hypothetical protein | DU478_05420 | Not Available | Positive | 1161116 - 1162474 | 49133.4 |
| tigr03986 family crispr-associated ramp protein | DU478_05425 | Not Available | Positive | 1162467 - 1164710 | 81775.0 |
| hypothetical protein | DU478_05430 | Not Available | Negative | 1165493 - 1167322 | 67525.1 |
| site-specific integrase | DU478_05435 | Not Available | Negative | 1167415 - 1168665 | 47104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
