Ferruginivarius sediminum strain WD2A32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Rhodovibrionaceae

Genus

Ferruginivarius

Description

Ferruginivarius sediminum strain WD2A32 is characterized by having a single replicon, which suggests a streamlined genetic organization potentially advantageous for its ecological niche. This strain is cataloged under the accession number QPMH00000000.1, indicating that it has been sequenced and is available for further study in genomic databases. The traits of Ferruginivarius sediminum strain WD2A32 imply its potential role in biogeochemical cycling, particularly in sediment environments where iron is present. The genus Ferruginivarius is typically associated with iron-rich habitats, and the presence of a single replicon may facilitate efficient adaptation and survival in such conditions. Understanding the specific ecological role of Ferruginivarius sediminum strain WD2A32 can provide insights into the dynamics of microbial communities in sedimentary ecosystems, particularly in relation to iron mobilization and transformation processes. The genomic data associated with this strain could further elucidate its metabolic pathways and interactions within its habitat, contributing to our comprehension of microbial ecology and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyRhodovibrionaceae
GenusFerruginivarius
SpeciesFerruginivarius sediminum
Strainstrain WD2A32

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferruginivarius sediminum strain WD2A32 WD2A32_scaffold72, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3848 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-ileNot AvailableNot AvailablePositive4185672 - 4185748Not Available
Trna-alaNot AvailableNot AvailablePositive4185838 - 4185913Not Available
Trna-metNot AvailableNot AvailablePositive4189339 - 4189415Not Available
is66 family insertion sequence hypothetical proteinDRB17_19655Not AvailableNegative4189416 - 41895063300.26
transposaseDRB17_19660Not AvailableNegative4189503 - 418989814619.5
gfo/idh/moca family oxidoreductaseDRB17_19665Not AvailableNegative4190017 - 419102435852.9
abc transporter atp-binding proteinDRB17_19670Not AvailableNegative4191070 - 419283364443.4
hypothetical proteinDRB17_19675Not AvailableNegative4192863 - 419375633276.2
nad-dependent epimerase/dehydratase family proteinDRB17_19680Not AvailableNegative4193720 - 419477238918.2
tetr family transcriptional regulatorDRB17_19685Not AvailableNegative4194953 - 41950764528.55

Displaying genes 3891 – 3900 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.